Browse of TCMCG079C14611 protein

CDS

Accession Number	TCMCG079C14611
gbkey	CDS
Protein Id	XP_017424735.1
Location	join(6708253..6708378,6709287..6709360,6709435..6709574,6715763..6715849,6715972..6716059,6716142..6716222,6718707..6718784,6718868..6718944,6719086..6719164,6719258..6719587,6720342..6720401,6720824..6721067,6721727..6721987,6722964..6724334,6729440..6729683,6729758..6729905,6730280..6730367,6730502..6730580,6731015..6731310,6731543..6732611,6738564..6738935,6741440..6741951)
Gene	LOC108333771
GeneID	108333771
Organism	Vigna angularis

Protein

Length	1967aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA328963
db_source	XM_017569246.1
Definition	PREDICTED: mediator of RNA polymerase II transcription subunit 13 [Vigna angularis]

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGGTCGGAGTCTGACCCAAACATAAACAGATTCGCCGTATCTCATTTGCAGCAAAACCCTAACTCAATTCGTCGAAGCCTTCATAACAATATTCCAGTTATGTGGACAAATGTTTTCAAAATCGGAAGTCTGCATCAGATATCATGGTTCCAGTATCTTCCTCATGAACCTGACCTAAACCCTCTACCTGATAAAAGTGTAAAAGTGGACCAAAAGGATGCCGCAAATTTACTGGTGCTTTCATCACATCTGCAGCTGCAGAAGGAGGGATTTCTCAGCACATGGACCAATTCCTTTGTTGGACCTTGGGATCCATCCCAGGGCTTGCATAATCCAGATGAAAAGATTAAGCTGTGGCTTTTTCTTCCGGGGCGTCATTCATCTGTTGTTGAGACTGCTCAGCCAGCAGTGTGCAGATTAAGAGTTGTTGCTTCTGGACTTTGGTTGGCTCCTGGTGACTCAGAAGAGGTTGCAGCTGCTCTCTCTCAAGCTTTGAGGAGTCGTATAGAAAGGGCTTTGCTTGGGTTATGTTACATGAGATTTGGAGATGTATTTTCAAAGTTTCATCAATTTCAAAGCGAAGAACTATTTAGAAGAGGACAGCCTGCAGTTGAGTTTGCCTTTGCTGCAACTGAGGAAGCCATCTTCATACATGTCATAGTGTCCTCAAAGCATATCCGGATGCTTACAACAAGTGATTTGGAAAAAGTATTAAAACATTCGGTGGAGTCTACATGTAGACTTCCAGTGATTGTTTCTCCTCATGGAATACGTGGCAGCTTGACTGGTTGTTCTCCAAGTGATCTTGTCAAGCAAAGTTATTTCAGTTCTACCAAATTTAGGGTGTCCAATGGAATTATAGGTCTACCATATAATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAAAATTGTTATGTTGAAGTAAGTCTGGGTTTCTCAAGATCTGGAACTGACAACTCTTTGCAGCCAAACAAAATTAGTGCCAGGAATTTACCCACACTTCATGTTGCTGAATCTCCTATTACCGGACGAAGTGATCACAAGGGATCAGCAGATCACTTGTCAGATTATGAGAAAACATTTCTGTATCCAACTGAGGCAGTGCTCGTGCCAGTTTTACAAACATCATTAGCGAGGTCTTCCTTGAGAAGATTTTGGCTGCAGAATTGGATGGGACCATCTCTTCCCAGTTCCTCTTCCTTTATTCAGTGTGCTGGTAATGAGGATTGTTGTGAAGATCCTTGGACTGAAATCAATGGAGCCCGTACGCAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGCAGTATTAGTAGCTTAAGTGCCAGTTCTAGTGATAGTGATTACAAGACTACAGGACCAAGTGAACTGGAGGCAGATGCTGATTCTTTAACATGTAGACAGTCTATGGTGTCTTCTGCTGATCAGCTGGATAGTGATGGCCCTAAATTGGGCTCTAAGAGGTCTCGAACAGGGGTGACAGAGTCATTAAGTACTGCCACAAACATTCCTGTGCAAGATACTTACATGTCTGATTTTGGTTCCGTGGAAGTGACCAATTCAGCTATTACAGGAGTAGGAAATGAGCCAATTGCGTCTTACTGGGACTGGGATGATGATGATAGGGGCATGGAAATGGATATTCAAGCCCTTCTATCAGAATTTGGTGATTTTGGTGACTTCTTTGAAAACGATGTCTTGCCATTTGGAGAGCCCCCAGGAACAGCAGAATCTCAGGCACTTATGTTTTCTTCCCCAGATTATGGAGATGTCAACAGCAGTCCGGGTGGTGTGATAGATGTTCCAGATCAAATACTTTTGCCTGTTGGGTTTCCTTCCTTTGAGAGCTTTAACCCCCCTCCTTCAACATCCGTAGAGGAATGTCTTAACAAAAGTCAAGATAACTTAAATAACTCTATGTCTTTGGGTCCATCCAATCATTCTCAAATGTTGTATACAAGGGAGTTTGATCATATAATGAAAGCTGAAGCAATGATGACATTTGCTGCTGAATTTGGTGCTGTTGAGACCCCTACCTGTGAGCTGTCCACAACATTATTCAGAAGCCCATATTTTCCAAAATGTCGTAAAGCAGAGAGTTCAAATTCAAGTTCAAACAATTACTTATATGGTTCAGCACCACCCTCTTCTCCTTGCAATGAAGGATCGGAGGGGAAGAATGGAATGTCTGTCAATACAAAAACAGGGTCTGGAAAACATGATTCTAGTACAAGTCTCCTCTCAAAACATTACTATACATTTGTGGAAAGTAGGAAAGAAAAAAATGATAAAAATCCTGTCATATGTAATGATAATAGCATTGCTAAATCTGAGGGGATACTGCCACTCTCAAACATTGGTTCTAATGCTATTGTCAAGTCTTCCCTTAGGAAGACAGCTGAAGGCACCCATGAACCAGAGCATGTTCTTCTATCTGCGAAAACTTTGTTGGCTACTGATATAACATGTGTTATGTTGCAAGCTTCTGTGTGCAGATTACGTCATACTCTCTTATCTTCAGGTAACCTAATGACCATTGGTTTTAGTAGGTCAACTGGGGTTTCATTTTTGAATCAGCTTCCTAGTGACCCAAATACAGCAACAGACAATATATCTGGCAAGTACGATGTGAAGAAGAAAGAAAATATACCCATCCGAATTGCAGGTGATATTGATGGAGGAATGCTTGACGGTCACTTGAATGCCCCTGTTGGTGTTTGGCGCACATTAGGATCTTCAAAAGTTGTAAAACCTTCAAATTCAGCTAACATGGAAGTTGGTTCATCCTTTTCTCATAGTTCTTTCAATGAAGAAGGTATTCTTTCTTATGGTCAAAGGAAGCCGCTTCAGGAGCTACTTGATGGGATTGCTTTGCTTGTACAACAAGCTCTTTCCTTTGTTGATCTAGCCTTGGATGCAGATTGTGGTGATGGTCCTTATGGTTTACTTGCAATGCAAGAACAGTGGAGGCGTGGATTCTGTTGTGGCCCTTCCATGGTTCATGCTGGCTGTGGGGGAACTCTTGCCTCTTCTCATTCTCTGGACATTGCCGGCTTGGAGTTAGTGGATCCACTTTCTGCCGATGTTCATGCATCCACTGTCATCAGTTTGCTGCAGTCTGACATAAAAACAGCATTGAAATCTGCTTTTTCCAATTTGGAAGGGCCATTATCTATAACTGATTGGTGCAAAGGATGCAATCCGTTGGTTGATACTGGAAGCATAGTTGATGGAGTCTCTGTAGAATCGACCAATAATGAATGTAGAGATTCTTCAGAACCAATGAGTCCATCCCAATCATCTGTTGGTGGATCTTCCAGTATTAAGGTTTCCAACATGATGGATGGTGCTAAGGTGGATGAGAATTCTCAAAGGAGATCTGGCCACGATTTATGCAGTACGGAGTCAGAGCAGCAAACATGTTCCCGACTTAAACCTACTCTTATTGCTCTTCCATTTCCTTCTATACTTGTGGGGTATCAGGATGATTGGCTCAAAACATCAGCAAACTCCTTGCAGCATTGGGAAAAAGCTCCTCTAGAGCCCTATGCTCTACAGAAACCTATTACGTATCATGTCGTATGCCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGATTTTTTTCAACAACTAGGAACAGTGTATGAGACATGCAAGCTGGGTACTCATTCACCTCAAGGCTTGGGGAATCAGATGGAGATAGAGTCTTCAAAGTTGTCATCTTGTGGTTTTGTTTTACTTGACTGCCCCCAATCAATGAAGATTGAGAGCAGTAATGCATCTCTTGTTGGTTCAGTGAGTGATTATTTTTTATCGTTATCAAATGGCTGGGACCTGACTAGTTATCTCAAGTCTCTTTCTAAGGCACTTAGAGGTTTGAAAATTGGCTCTTGCTTTTCTACAAATCCAGGCGAAGGAAGTAACAGTTCGTGCTTGGTAATCTATGTGGTATGCCCATTTCCTGATCCCACTGCAATTTTGCAAACTGTAATTGAATCTTCTGTTGCGATTGGATCTGTAGTCCAACAGTTGGATAGAGAGAGGAAATCTAGCTTGCATAGTCAGGTTGTGAAGGCATTAAGTGGCTTGGCTGCTGTCGACGAGGCTTCTCCATCTAATGTCCTTGTGCTTTCAGGGTTTAGTATTCCAAAATTGGTCTTGCAGATTGTTACTGTGGATGCCATTTTCAGAGTCACTAGCCCATCTGTCAGCGAACTTGTCATTTTAAAAGAGACTGCTTTTACTGTGTACTGCAAGGCACGTCGAATTTCACGTGGAATCTCTAGTGATTTTTCTCAGTCTGCATTTTCTGGTAGATCTCATTCTGTTTTGACGCAGCTGCCTTCTCCCATTTCTGGGATGTGGAAAGATTGTGTTGGTCCTAGAATGGCAGGACATTCTCTTCCAAGAGAGGGTGACATTGATGCTAGCTTGAGGCCTGGTACTTGGGATAATTCTTGGCAGCCAACAAGGACTGGGGGATTGAGCTGTGATGCAAGTAGAACTGGGGATATTTTTCTCCTTGATGAAATTCGTTACATGTTTGAACCCCTTTTTATTCTGGCAGAACCAGGTTCTCTTGAAAGTGGTATTTCAGTTATTGGGAGTCCCACTTCAGAATCTTCTAAGGCATTGGTTGATGACAGTAGTGGTAACTATGTACAGAGTACAAGTACAGCAGGAAGTGTGGAGTCTGCTTCAAGCACTGATGGATCTGGGTCTGATCCGAAGACTCCTGCAAGCCTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTTGTATGCATCTGGACAGATTCGAGGGGAGAATTGCTGGACTGTAACATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACAAAGGGACTGCAATGCCTATTTGTTCAAATTCTTCAGCAAGGTTGTCTGATAATTCAATCTTGTGACCCTGGCCTTGCAAGGCCTCGAGATTTTGTGATAGCACGCATTGGAGGGTTTTATGAGCTCGAGTATCTTGAATGGCAGAAAGCCATTTATTCAGTTGGTGTATCTGAGATGAAGAGATGGCCTCTGCAATTGCGGAAATCTATGTCTGATGGGTTGTCTGCAACAAGTAATGGTTCTTCTTTGCAACAACAAGACATGAGTTTGATTCCAGAACGAACTCTTCCTTCCTCGCCTAGTCCCTTGTACAGCCCCCATACCAAATCCACTGGTTTTATGAAAGGCAATTTAGGGCAACCTAGTGCAAGAAAGCAACTTATGGGTGGACATTCTATGGTTGACAATTCAAGGGGTTTGCTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCCATGGACCATACATTACAGCTAGTTCACCCAGCAGATTCCTCCACTCCTGGTTACATCGAAGGTTTCACTCCAGTGAAGTCTCTTGGTTCTACATCTTCTGCATACATTCTAATTCCTTCTCCCAGCATGCGATTTCTTCCTCCGACAGTTCTTCAACTCCCCACGTGCCTTCTCTCTACTGGATTTGTGGTTTCAAAAGCAGTACCTTCCATGAGGAAGGACTACAGAAGCAACCTAAAGGAAGAATGGCCCTCTATACTTTCAGTGAGCCTCATTGATTATTATGGAGGTACTAACATCCCCCAAGAGAAAGTTGTCCGAGGAATTAACAAGCAAGCTGGTAGAAGTTTAAGCTGGGAAGCTAAAGATTTTGAAATTGAGACCCACTTGGTTCTGGAGTCTATTGCAGCAGAGCTTCATGCCTTGTCTTGGATGACAGTGAGCCCCGTATACTTAGAGCGGCGGACTGCGCTTCCCTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACTTTGCCGATAAAGAGCTCACCAAGCAGTCAGAGAAATCTTGA

Protein:   MRSESDPNINRFAVSHLQQNPNSIRRSLHNNIPVMWTNVFKIGSLHQISWFQYLPHEPDLNPLPDKSVKVDQKDAANLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVVETAQPAVCRLRVVASGLWLAPGDSEEVAAALSQALRSRIERALLGLCYMRFGDVFSKFHQFQSEELFRRGQPAVEFAFAATEEAIFIHVIVSSKHIRMLTTSDLEKVLKHSVESTCRLPVIVSPHGIRGSLTGCSPSDLVKQSYFSSTKFRVSNGIIGLPYNVSQGVGCQLRGQNCYVEVSLGFSRSGTDNSLQPNKISARNLPTLHVAESPITGRSDHKGSADHLSDYEKTFLYPTEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPSSSSFIQCAGNEDCCEDPWTEINGARTQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSMVSSADQLDSDGPKLGSKRSRTGVTESLSTATNIPVQDTYMSDFGSVEVTNSAITGVGNEPIASYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALMFSSPDYGDVNSSPGGVIDVPDQILLPVGFPSFESFNPPPSTSVEECLNKSQDNLNNSMSLGPSNHSQMLYTREFDHIMKAEAMMTFAAEFGAVETPTCELSTTLFRSPYFPKCRKAESSNSSSNNYLYGSAPPSSPCNEGSEGKNGMSVNTKTGSGKHDSSTSLLSKHYYTFVESRKEKNDKNPVICNDNSIAKSEGILPLSNIGSNAIVKSSLRKTAEGTHEPEHVLLSAKTLLATDITCVMLQASVCRLRHTLLSSGNLMTIGFSRSTGVSFLNQLPSDPNTATDNISGKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGSSKVVKPSNSANMEVGSSFSHSSFNEEGILSYGQRKPLQELLDGIALLVQQALSFVDLALDADCGDGPYGLLAMQEQWRRGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKSAFSNLEGPLSITDWCKGCNPLVDTGSIVDGVSVESTNNECRDSSEPMSPSQSSVGGSSSIKVSNMMDGAKVDENSQRRSGHDLCSTESEQQTCSRLKPTLIALPFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLGNQMEIESSKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRGLKIGSCFSTNPGEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQLDRERKSSLHSQVVKALSGLAAVDEASPSNVLVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYCKARRISRGISSDFSQSAFSGRSHSVLTQLPSPISGMWKDCVGPRMAGHSLPREGDIDASLRPGTWDNSWQPTRTGGLSCDASRTGDIFLLDEIRYMFEPLFILAEPGSLESGISVIGSPTSESSKALVDDSSGNYVQSTSTAGSVESASSTDGSGSDPKTPASLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLIIQSCDPGLARPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMSDGLSATSNGSSLQQQDMSLIPERTLPSSPSPLYSPHTKSTGFMKGNLGQPSARKQLMGGHSMVDNSRGLLHWAQSISFVAVSMDHTLQLVHPADSSTPGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPPTVLQLPTCLLSTGFVVSKAVPSMRKDYRSNLKEEWPSILSVSLIDYYGGTNIPQEKVVRGINKQAGRSLSWEAKDFEIETHLVLESIAAELHALSWMTVSPVYLERRTALPFHCDMVLRLRRLLHFADKELTKQSEKS